U
    ½mœdwD  ã                   @   sŒ   d gZ ddlZddlmZmZmZ ddlmZ er:ddl	Z	dd„ Z
dd„ Zd	d
„ ZG dd„ deƒZeeƒZdd„ Zde_dd„ Zdd„ ZdS )Úbsé    N)Úhave_pandasÚno_picklingÚassert_no_pickling)Ústateful_transformc                 C   s<  zddl m} W n tk
r,   tdƒ‚Y nX t tj|td�¡}|jdksPt‚| 	¡  t
|ƒ}t | ¡} | jdkr’| jd dkr’| d d …df } | jdks t‚t | ¡t |¡k sÈt | ¡t |¡krÐtdƒ‚t|ƒ|d  }tj| jd |ftd�}t|ƒD ]6}t |f¡}d||< || |||fƒ|d d …|f< �q |S )Nr   )Úsplevz#spline functionality requires scipy)Zdtypeé   é   zksome data points fall outside the outermost knots, and I'm not sure how to handle them. (Patches accepted!))Zscipy.interpolater   ÚImportErrorÚnpÚ
atleast_1dÚasarrayÚfloatÚndimÚAssertionErrorÚsortÚintÚshapeÚminÚmaxÚNotImplementedErrorÚlenÚemptyÚrangeÚzeros)ÚxÚknotsÚdegreer   Zn_basesÚbasisÚiZcoefs© r    úF/home/sam/Atlas/atlas_env/lib/python3.8/site-packages/patsy/splines.pyÚ_eval_bspline_basis   s*    
( r"   c                    s:   t  |¡}t  ‡ fdd„|jdd�D ƒ¡}|j|jdd�S )Nc                    s   g | ]}t  ˆ d | ¡‘qS )éd   )r   Z
percentile)Ú.0Úprob©r   r    r!   Ú
<listcomp>A   s   ÿz&_R_compat_quantile.<locals>.<listcomp>ÚC)Úorder)r   r   ZravelZreshaper   )r   ZprobsZ	quantilesr    r&   r!   Ú_R_compat_quantile>   s
    

ÿr*   c                  C   s`   dd„ } | ddgddƒ | ddgddƒ | ddgdd	gdd
gƒ | t tdƒƒdd	gddgƒ d S )Nc                 S   s   t  t| |ƒ|¡st‚d S ©N)r   Zallcloser*   r   )r   r%   Úexpectedr    r    r!   ÚtF   s    z"test__R_compat_quantile.<locals>.té
   é   g      à?é   g333333Ó?é   gffffffæ?é   gš™™™™™@g333333@)Úlistr   )r-   r    r    r!   Útest__R_compat_quantileE   s
    r4   c                   @   s8   e Zd ZdZdd„ Zddd„Zd	d
„ Zddd„ZeZ	dS )ÚBSa3  bs(x, df=None, knots=None, degree=3, include_intercept=False, lower_bound=None, upper_bound=None)

    Generates a B-spline basis for ``x``, allowing non-linear fits. The usual
    usage is something like::

      y ~ 1 + bs(x, 4)

    to fit ``y`` as a smooth function of ``x``, with 4 degrees of freedom
    given to the smooth.

    :arg df: The number of degrees of freedom to use for this spline. The
      return value will have this many columns. You must specify at least one
      of ``df`` and ``knots``.
    :arg knots: The interior knots to use for the spline. If unspecified, then
      equally spaced quantiles of the input data are used. You must specify at
      least one of ``df`` and ``knots``.
    :arg degree: The degree of the spline to use.
    :arg include_intercept: If ``True``, then the resulting
      spline basis will span the intercept term (i.e., the constant
      function). If ``False`` (the default) then this will not be the case,
      which is useful for avoiding overspecification in models that include
      multiple spline terms and/or an intercept term.
    :arg lower_bound: The lower exterior knot location.
    :arg upper_bound: The upper exterior knot location.

    A spline with ``degree=0`` is piecewise constant with breakpoints at each
    knot, and the default knot positions are quantiles of the input. So if you
    find yourself in the situation of wanting to quantize a continuous
    variable into ``num_bins`` equal-sized bins with a constant effect across
    each bin, you can use ``bs(x, num_bins - 1, degree=0)``. (The ``- 1`` is
    because one degree of freedom will be taken by the intercept;
    alternatively, you could leave the intercept term out of your model and
    use ``bs(x, num_bins, degree=0, include_intercept=True)``.

    A spline with ``degree=1`` is piecewise linear with breakpoints at each
    knot.

    The default is ``degree=3``, which gives a cubic b-spline.

    This is a stateful transform (for details see
    :ref:`stateful-transforms`). If ``knots``, ``lower_bound``, or
    ``upper_bound`` are not specified, they will be calculated from the data
    and then the chosen values will be remembered and re-used for prediction
    from the fitted model.

    Using this function requires scipy be installed.

    .. note:: This function is very similar to the R function of the same
      name. In cases where both return output at all (e.g., R's ``bs`` will
      raise an error if ``degree=0``, while patsy's will not), they should
      produce identical output given identical input and parameter settings.

    .. warning:: I'm not sure on what the proper handling of points outside
      the lower/upper bounds is, so for now attempting to evaluate a spline
      basis at such points produces an error. Patches gratefully accepted.

    .. versionadded:: 0.2.0
    c                 C   s   i | _ d | _d | _d S r+   )Ú_tmpÚ_degreeÚ
_all_knots)Úselfr    r    r!   Ú__init__ˆ   s    zBS.__init__Né   Fc           	      C   sx   ||||||dœ}|| j d< t |¡}|jdkrN|jd dkrN|d d …df }|jdkr`tdƒ‚| j  dg ¡ |¡ d S )N)Údfr   r   Úinclude_interceptÚlower_boundÚupper_boundÚargsr	   r   r   z1input to 'bs' must be 1-d, or a 2-d column vectorÚxs)r6   r   r   r   r   Ú
ValueErrorÚ
setdefaultÚappend)	r9   r   r<   r   r   r=   r>   r?   r@   r    r    r!   Úmemorize_chunk�   s    û


zBS.memorize_chunkc                 C   sf  | j }|d }| ` |d dk r0td|d f ƒ‚t|d ƒ|d krTtd| jf ƒ‚t |d ¡}|d d kr‚|d d kr‚td	ƒ‚|d d
 }|d d k	�rR|d | }|d s¸|d
7 }|dk rètd|d |d |d |d | f ƒ‚|d d k	�r.t|d ƒ|k�rRtd|d |d |t|d ƒf ƒ‚n$t dd
|d ¡d
d… }t||ƒ}|d d k	�rh|d }|d d k	�r€|d }n
t 	|¡}|d d k	�r¢|d }	n
t 
|¡}	||	k�rÆtd||	f ƒ‚t |¡}|jd
k�rätdƒ‚t ||k ¡�rtd|||k  |f ƒ‚t ||	k¡�r4td|||	k |	f ƒ‚t ||	g| |f¡}
|
 ¡  |d | _|
| _d S )Nr@   r   r   z&degree must be greater than 0 (not %r)z"degree must be an integer (not %r)rA   r<   r   zmust specify either df or knotsr   r=   zHdf=%r is too small for degree=%r and include_intercept=%r; must be >= %szAdf=%s with degree=%r implies %s knots, but %s knots were providedr	   éÿÿÿÿr>   r?   z#lower_bound > upper_bound (%r > %r)zknots must be 1 dimensionalz1some knot values (%s) fall below lower bound (%r)z1some knot values (%s) fall above upper bound (%r))r6   rB   r   r7   r   Zconcatenater   Úlinspacer*   r   r   r   r   Úanyr   r8   )r9   Útmpr@   r   r)   Zn_inner_knotsZknot_quantilesZinner_knotsr>   r?   Z	all_knotsr    r    r!   Úmemorize_finish£   sŠ    ÿÿ
ûþ 
ÿþ





ÿ

ÿþ
ÿþÿ
zBS.memorize_finishc           	      C   sT   t || j| jƒ}|s(|d d …dd …f }trPt|tjtjfƒrPt |¡}|j|_|S )Nr   )	r"   r8   r7   r   Ú
isinstanceÚpandasZSeriesZ	DataFrameÚindex)	r9   r   r<   r   r   r=   r>   r?   r   r    r    r!   Ú	transformì   s    
zBS.transform)NNr;   FNN)NNr;   FNN)
Ú__name__Ú
__module__Ú__qualname__Ú__doc__r:   rE   rJ   rN   r   Ú__getstate__r    r    r    r!   r5   M   s   :     þ
I     þ
r5   c                  C   s\  ddl m}  ddlm}m}m} | d¡}d}| d¡}|| dksH�qJ|d7 }| d|¡}|||… }i }	|D ]}
|
 dd¡\}}||	|< qpt|	d	 ƒt	|	d
 ƒt	|	d ƒdœ}|	d dkrÞt	|	d ƒ\}}||d< ||d< |	d dk|d< t
 t	|	d ƒ¡}|d
 d k	�r&|jd |d
 k�s&t‚| td||f|Ž |d7 }|d }q8||k�sXt‚d S )Nr   )Úcheck_stateful)ÚR_bs_test_xÚR_bs_test_dataÚR_bs_num_testsÚ
z--BEGIN TEST CASE--r   z--END TEST CASE--ú=r   r<   r   )r   r<   r   zBoundary.knotsÚNoner>   r?   Z	interceptÚTRUEr=   ÚoutputF)Zpatsy.test_staterT   Zpatsy.test_splines_bs_datarU   rV   rW   ÚsplitrM   r   Úevalr   r   r   r   r5   )rT   rU   rV   rW   ÚlinesZ	tests_ranZ	start_idxZstop_idxÚblockZ	test_dataÚlineÚkeyÚvalueÚkwargsÚlowerÚupperr\   r    r    r!   Útest_bs_compatü   s<    





û
rg   r   c                  C   sX  t  ddd¡} t| ddgddd�}|jd dks4t‚t  d¡}d|| dk < t  |d d …df |¡sft‚t  d¡}d|| dk| dk @ < t  |d d …df |¡s t‚t  d¡}d|| dk< t  |d d …d	f |¡sÒt‚t  tddd	gddgdd
�ddgddgddgg¡�s
t‚t| ddgddd�}t| ddgddd�}t  |d d …dd …f |¡�sTt‚d S )NrF   r   r.   é   r   T)r   r   r=   r;   r	   )r   r   r=   F)r   Zlogspacer   r   r   r   Úarray_equal)r   ÚresultZ
expected_0Z
expected_1Z
expected_2Z
result_intZresult_no_intr    r    r!   Útest_bs_0degree-  s.    


ÿþþ
rk   c               	   C   s´  dd l } t ddd¡}| jtt|ddd� | jtt|ddd� |  tt|¡ t|dddgd	 d
� t|dddgd d
� t|dddgd dd� t|dddgd dd� | jtt|dddgd d
� | jtt|dddgd	 d
� | jtt|dddgd dd� | jtt|dddgd dd� | jtt|dddgd d
� | jtt|dddgd d
� | jtt|dddgd dd� | jtt|dddgd	 dd� | jtt|ddd� | jtt|ddd� | jtt|ddd� | jtt|ddd� | jtt|dddd� |  ttt ||f¡d¡ t t|ddgd�t|ddgd�¡�s:t	‚| jtt|dgdggd� | jtt|ddgd� | jtt|ddgdd� | jtt|ddgd� | jtt|ddgdd� d S )Nr   iöÿÿÿr.   r/   r;   )r>   )r?   Fé   )r<   r=   r   Té   é	   r   )r<   r=   r   r   é   é   )r<   r   rF   g      ø?)r>   r?   rh   )r   )r   r?   iìÿÿÿéüÿÿÿéýÿÿÿ)r   r>   )
Úpytestr   rG   Zraisesr   r   rB   Zcolumn_stackri   r   )rs   r   r    r    r!   Útest_bs_errorsH  s
       ÿ    ÿ    þ    þ    ÿ    ÿ    þ    þ   ÿ   ÿ   ÿ   ÿ    ÿ  ÿ*  
ÿ  ÿ   ÿ  ÿ   ÿrt   )Ú__all__Únumpyr   Z
patsy.utilr   r   r   Zpatsy.stater   rL   r"   r*   r4   Úobjectr5   r   rg   Zslowrk   rt   r    r    r    r!   Ú<module>   s   , .-