U
    ½mœd6C  ã                   @   s\  d dl Z d dlZd dlmZ d dlZd dlmZ d dlmZ d dl	m
Z
 d dlmZ d dlmZ d dlmZ d d	lmZ d d
lmZmZ d dlmZ ddddgZddgZdd„ Zdd„ Zdd„ Zdd„ Zdd„ Zdd„ Zdd„ Zeed �d!d"„ ƒZd#d$„ Z eed �d%d&„ ƒZ!eed �d'd(„ ƒZ"ej# $d)¡ej# %d*d+d,d-d.g¡d/d0„ ƒƒZ&d1d2„ Z'd3d4„ Z(dS )5é    N)Úgammaln)Úassert_almost_equal)Úassert_array_equal)Úadjusted_rand_score)Ú_log_dirichlet_norm)Ú_log_wishart_norm)ÚBayesianGaussianMixture)Ú
RandomData)ÚConvergenceWarningÚNotFittedError)Úignore_warningsÚfullÚtiedÚdiagÚ	sphericalÚdirichlet_processÚdirichlet_distributionc                  C   sH   t j d¡} |  d¡}tt  |¡ƒt  t|ƒ¡ }t|ƒ}t||ƒ d S )Nr   é   )ÚnpÚrandomÚRandomStateÚrandr   Úsumr   r   )ÚrngZweight_concentrationÚexpected_normÚpredected_norm© r   úd/home/sam/Atlas/atlas_env/lib/python3.8/site-packages/sklearn/mixture/tests/test_bayesian_mixture.pyÚtest_log_dirichlet_norm   s    
ÿr   c            
      C   sÎ   t j d¡} d\}}t  |  |¡¡d }|t  tdd| ƒ¡ }t  d¡}tt	||ƒƒD ]Z\}\}}||d| t  d¡   t  
td|t  d|¡d d …t jf   ƒd¡  ||< qXt|||ƒ}	t||	ƒ d S )Nr   )é   r   ç      ð?r   r   g      à?g       @)r   r   r   Úabsr   ÚlogÚrangeÚemptyÚ	enumerateÚzipr   r   ZarangeÚnewaxisr   r   )
r   Ún_componentsÚ
n_featuresZdegrees_of_freedomZlog_det_precisions_cholr   ÚkZdegrees_of_freedom_kZ	log_det_kr   r   r   r   Útest_log_wishart_norm)   s2    
ÿÿÿûÿÿ

  ÿr+   c                  C   sn   t j d¡} d\}}}|  ||¡}|  ¡ }t|| d� |¡}t||jƒ t|| d� |¡}td| |jƒ d S )Nr   )é
   r   r   )Úweight_concentration_priorÚrandom_state©r(   r.   r    )r   r   r   r   r   Úfitr   Zweight_concentration_prior_)r   Ú	n_samplesr(   r)   ÚXr-   Úbgmmr   r   r   Ú2test_bayesian_mixture_weights_prior_initialisationE   s    
 ÿþr4   c                  C   s¸   t j d¡} d\}}}|  ||¡}|  ¡ }t|| d� |¡}t||jƒ t| d� |¡}td|jƒ |  |¡}t||| d� |¡}t||jƒ t|| d� |¡}t|j	dd�|jƒ d S )	Nr   )r,   é   r   )Úmean_precision_priorr.   ©r.   r    )r(   Ú
mean_priorr.   r/   ©Úaxis)
r   r   r   r   r   r0   r   Zmean_precision_prior_Zmean_prior_Úmean)r   r1   r(   r)   r2   r6   r3   r8   r   r   r   Ú/test_bayesian_mixture_mean_prior_initialisationV   s0    
 ÿþ
  ÿþr<   c               
   C   sÎ  t j d¡} d\}}|  ||¡}|d }t|| d�}d|d › d|d›d	�}tjt|d
�� | |¡ W 5 Q R X |  ¡ | d }t|| d� |¡}t	||j
ƒ |}t|| d� |¡}t	||j
ƒ t j|jdd�d t j|jdd�d t  t  t j|jdd�¡¡d |  ¡ dœ}	t| d�}dD ]0}
|
|_|	|
 |_| |¡ t	|	|
 |jƒ �qt  t  |j¡¡t  t  |j¡¡t j|ddd�t j|ddd� ¡ dœ}tdd�}dD ]&}
|
|_| |¡ t	||
 |jƒ �q¢d S )Nr   ©r,   r   r    )Údegrees_of_freedom_priorr.   z@The parameter 'degrees_of_freedom_prior' should be greater than é   z
, but got z.3fÚ.©Úmatch)Zbiasr,   r   r5   )r   r   r   r   r7   )r:   Zddof)r   r   r   r   r   ÚpytestÚraisesÚ
ValueErrorr0   r   Zdegrees_of_freedom_prior_ÚcovÚTr   Z
atleast_2dÚcovariance_typeÚcovariance_priorZcovariance_prior_Úvarr;   )r   r1   r)   r2   Zbad_degrees_of_freedom_prior_r3   Úmsgr>   Z degrees_of_freedom_prior_defaultrI   Zcov_typeZcovariance_prior_defaultr   r   r   Ú5test_bayesian_mixture_precisions_prior_initialisationr   sh     ÿÿ ÿþ ÿþ ÿü


ü

rL   c               	   C   sV   t j d¡} d\}}t| d�}|  ||¡}d}tjt|d�� | |¡ W 5 Q R X d S )Nr   r=   r7   z8This BayesianGaussianMixture instance is not fitted yet.rA   )	r   r   r   r   r   rC   rD   rE   Zscore)r   r1   r)   r3   r2   rK   r   r   r   Ú%test_bayesian_mixture_check_is_fitted±   s    
rM   c            	   	   C   sô   t j d¡} d\}}|  ||¡}tdd| d� |¡}|jt  |j¡ }t||j	ƒ tt  |j	¡dƒ tdd| d� |¡}|jd |jd  }|jd | }|jd | t  
dt  |d d	… ¡f¡ }|t  |¡ }t||j	ƒ tt  |j	¡dƒ d S )
Nr   r=   r   r5   )Úweight_concentration_prior_typer(   r.   r    r   r?   éÿÿÿÿ)r   r   r   r   r   r0   Zweight_concentration_r   r   Úweights_ZhstackZcumprod)	r   r1   r)   r2   r3   Zexpected_weightsZdpgmmZweight_dirichlet_sumÚtmpr   r   r   Útest_bayesian_mixture_weights¾   s@    ýüýüÿÿþÿrR   )Úcategoryc            
      C   s    t j d¡} t| dd�}|j}tD ]x}tD ]n}|j| }t|d| |dd| dd�}t j	 }t
d	ƒD ]*}|}	| |¡j}||	ks‚t‚|jrb qŽqb|js*t‚q*q"d S )
Nr   é   ©Úscaler   Tr?   çü©ñÒMbP?)rN   r(   rH   Z
warm_startÚmax_iterr.   ÚtoliX  )r   r   r   r	   r(   Ú
PRIOR_TYPEÚCOVARIANCE_TYPEr2   r   Zinftyr#   r0   Zlower_bound_ÚAssertionErrorZ
converged_)
r   Ú	rand_datar(   Ú
prior_typeÚ
covar_typer2   r3   Zcurrent_lower_boundÚ_Zprev_lower_boundr   r   r   Útest_monotonic_likelihoodã   s.    
ù	ra   c            
   	   C   sž  t j d¡} t| dd�}|jd }|j}tD �]j}t|d| ddddd�}| |¡ | 	|t j d¡¡ |j
|jd d …t jt jf  }t|d| d	dddd�}| |¡ | 	|t j d¡¡ |j
|j }t|t  |d¡ƒ t|d| d
dddd�}| |¡ | 	|t j d¡¡ |j
|jd d …t jf  }t|t  dd„ |D ƒ¡ƒ t|d| ddddd�}| |¡ | 	|t j d¡¡ |j
|j }	t|	t  |d¡ƒ q,d S )Nr   é   rU   r   r   r?   çH¯¼šò×z>)rN   r(   rH   rX   r.   rY   r   r   c                 S   s   g | ]}t  |¡‘qS r   )r   r   )Ú.0rF   r   r   r   Ú
<listcomp>9  s     z+test_compare_covar_type.<locals>.<listcomp>r   )r   r   r   r	   r2   r(   rZ   r   Z_check_parametersZ_initialize_parametersÚcovariances_Zdegrees_of_freedom_r'   r   r;   Úarray)
r   r]   r2   r(   r^   r3   Zfull_covariancesZtied_covarianceZdiag_covariancesZspherical_covariancesr   r   r   Útest_compare_covar_type  sp    

ú
ÿú
ú
 ÿú
rh   c                  C   sü   t j d¡} t| dd�}d|j d }}t|d| ddd�}tD ]¸}||_| |j	| ¡ |dkr’t
|j|jƒD ] \}}tt  ||¡t  |¡ƒ qnq>|d	kr¸tt  |j|j¡t  |¡ƒ q>|d
krÞt|j|j t  ||f¡ƒ q>t|j|j t  |¡ƒ q>d S )Nr   rb   rU   r   éd   rW   ©r(   rX   r.   rY   Ú	reg_covarr   r   r   )r   r   r   r	   r(   r   r[   rH   r0   r2   r&   rf   Zprecisions_r   ÚdotÚeyeZones)r   r]   r(   r)   r3   r_   ZcovarÚ	precisionr   r   r   Útest_check_covariance_precisionL  s<        ÿ ÿ
þ
 ÿro   c               
   C   sª   t j d¡} t| dd�}d|j }tD ]~}tD ]t}|j| }t||ddddd� 	|¡}t||ddddd� 	|d ¡}t
|j|jd ƒ t
|j|jƒ t
|j|jƒ q.q&d S )Nr   ri   rU   r   rW   )rN   r(   rX   r.   rY   rk   )r   r   r   r	   r(   rZ   r[   r2   r   r0   r   Zmeans_rP   rf   )r   r]   r(   r^   r_   r2   Úbgmm1Úbgmm2r   r   r   Útest_invariant_translationp  s:    

úùúù	rr   zignore:.*did not converge.*zseed, max_iter, tol)r   r   rc   )r?   r   çš™™™™™¹?)r5   é,  rc   )é   rt   rs   c                 C   s‚   t j | ¡}t|ddd�}d|j }tD ]T}t||||dd�}||_t 	|¡}|j
| }	| |	¡ |	¡}
| |	¡}t|
|ƒ q(d S )Né2   rb   )r1   rV   r   r   rj   )r   r   r   r	   r(   r[   r   rH   ÚcopyÚdeepcopyr2   r0   ÚpredictÚfit_predictr   )ÚseedrX   rY   r   r]   r(   r_   rp   rq   r2   ZY_pred1ZY_pred2r   r   r   Ú!test_bayesian_mixture_fit_predict‘  s"    
û


r|   c                  C   sD   t j d¡ dd¡} tdddd�}| | ¡}| | ¡}t||ƒ d S )Nr   rv   r   r,   )r(   Zn_initr.   )r   r   r   Zrandnr   rz   ry   r   )r2   ZgmZy_pred1Zy_pred2r   r   r   Ú(test_bayesian_mixture_fit_predict_n_init±  s
    

r}   c            
      C   s¸   t j d¡} t| ƒ}tD ]š}tD ]�}|j| }|j}t|j	| ||d�}d}t
jt|d�� | |¡ W 5 Q R X | |¡ | |¡}| |¡jdd�}	t||	ƒ t||ƒdks t‚q qd S )Nr   )r(   r.   rN   rH   z{This BayesianGaussianMixture instance is not fitted yet. Call 'fit' with appropriate arguments before using this estimator.rA   r?   r9   gffffffî?)r   r   r   r	   rZ   r[   r2   ÚYr   r(   rC   rD   r   ry   r0   Zpredict_probaZargmaxr   r   r\   )
r   r]   r^   r_   r2   r~   r3   rK   ZY_predZY_pred_probar   r   r   Ú+test_bayesian_mixture_predict_predict_probaº  s*    
ü	ÿ


r   ))rw   Únumpyr   Zscipy.specialr   rC   Zsklearn.utils._testingr   r   Zsklearn.metrics.clusterr   Z!sklearn.mixture._bayesian_mixturer   r   Zsklearn.mixturer   Z+sklearn.mixture.tests.test_gaussian_mixturer	   Zsklearn.exceptionsr
   r   r   r[   rZ   r   r+   r4   r<   rL   rM   rR   ra   rh   ro   rr   ÚmarkÚfilterwarningsZparametrizer|   r}   r   r   r   r   r   Ú<module>   sP   ?%
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