o
     AúdÞ%  ã                   @   sÔ   d dl mZ d dlmZmZmZ ddlmZmZm	Z	 d dl
mZmZmZ d dlZd dlZd dlZd dlZd dlZddlmZ dd	„ Zd
d„ Zdd„ Zedd�dd„ ƒZedd�dd„ ƒZedd„ ƒZedd„ ƒZdS )é    )Úlogin_required)ÚrenderÚredirectÚget_object_or_404é   )ÚnewDatasetFormÚEditDatasetFormÚ	LabelForm)Úprocess_fileÚ	plot_umapÚplot_searchN)ÚDatasetc                 C   s
   t | dƒS )Nzdataset/edit.html)r   )Úrequest© r   ú"/home/tommy/Atlas/dataset/views.pyÚtest   s   
r   c              	   C   sB   t t|d�}|jj}t|ƒ}t| |ƒ\}}t| d|||||dœƒS )N©Úidzdataset/detail.html)ÚdatasetÚumap_fig_dataÚumap_search_dataÚformÚ	file_path)r   r   ÚdataÚpathr   r   r   )r   Ú
dataset_idr   r   r   r   r   r   r   r   Údetail   s   ûr   c                 C   s   || }| | j |k S )N)Úcluster)ÚmarkersÚcluster_numberÚupdated_cluster_namesÚcluster_namer   r   r   Úfilter_by_cluster&   s   r"   z/login/)Ú	login_urlc                 C   s4  t t|d�}t|jƒ}|jj}t|ƒ}t| |dd�\}}|jj}t 	|¡}|j
d jj ¡ }	|jd }
t|
ƒ |jd }|	 ¡ }t| jƒ}t| j|d�}| jdkrÍd	| jv r¨| ¡ r¨|jd
 }t| j d¡ƒ}|jd }|dkr‰|t|ƒk r‰|||< ||
|< | d|¡ |
|jd< | jj}|› d|j› d�}| d| ¡ ||_| ¡  t|ƒ}d| jv rÌ| ¡ rÌ| jj}|› d|j› d�}| d| ¡ ||_| ¡  ntƒ }G dd„ dƒ}||ƒ}t  !d|j"f¡}|d j#j$D ]=}t  %|d | |d | |d | |d | t j&|gt|d | ƒ dd�f¡j'}|j(d dk�r|}qét  %||f¡}qét)j*|dd … g d¢d�}||j+dk t,|j-ƒdk@  }|ddg  ¡ }|d  .t/¡|d< t0|ƒD ]\}}||j1|d t/|ƒkdf< �qWg }|D ]}t) *t2|||ƒ 3d ¡¡}|j4d!d"�}| 5||f¡ �qnt6| d#||||||||d$œƒS )%Nr   Ú )ÚqueryÚleidenÚleiden_colorsÚrank_genes_groups©ÚinstanceÚPOSTÚ
save_labelÚlabelr   Úcolorr   Ú_z.h5adzmedia/Úsave_descriptionc                   @   s   e Zd Zdd„ ZdS )zlabel.<locals>.ZeroArrayObjectc                 S   s$   t |d jjƒ| _t | j¡| _d S )NÚnames)ÚlenÚdtyper1   Úarray_lengthÚnpÚzerosÚ
zero_array)ÚselfÚresultsr   r   r   Ú__init__j   s   z'label.<locals>.ZeroArrayObject.__init__N)Ú__name__Ú
__module__Ú__qualname__r:   r   r   r   r   ÚZeroArrayObjecti   s    r>   r1   ÚscoresÚ	pvals_adjÚlogfoldchangesÚobject)r3   r   )ÚGener?   Úpval_adjÚlfcr   )Úcolumnsgš™™™™™©?rC   r   é
   F)Úindexúdataset/label.html)r   r   r   Ú
label_formÚsearch_formÚdescription_formÚ
table_datar    )7r   r   ÚrangeÚcluster_countr   r   r   r   ÚscÚreadÚobsÚcatÚ
categoriesÚtolistÚunsÚprintÚcopyr	   r+   r   ÚmethodÚis_validÚcleaned_dataÚintÚgetr2   Úrename_categoriesÚuserÚusernameÚnameÚwriteÚsaver5   Úemptyr4   r3   r1   ÚvstackÚarrayÚTÚshapeÚpdÚ	DataFramerD   ÚabsrE   ÚastypeÚstrÚ	enumerateÚlocr"   ÚheadÚto_htmlÚappendr   )r   r   r   Úclustersr   r   rK   r   Úprocessed_dataÚcluster_namesÚcluster_colorsr9   r    rJ   rL   Ú	new_labelr   Ú	new_colorÚusername_prefixÚ	h5ad_filer>   ÚobjÚoutÚgroupÚgroup_arrayr   Úfiltered_markersÚupdated_namerM   Úfiltered_clusters_subsetÚ
table_htmlr   r   r   r-   ,   sš   










€



ûúør-   c                 C   sÎ   | j dkr[t| j| jƒ}| ¡ rZ|jdd�}| j|_| jd }|j}t	j
 dd|¡}t	j|dd� t |d	¡�}| |¡ W d   ƒ n1 sGw   Y  ||_| ¡  td
|jd�S ntƒ }t| d|ddœƒS )Nr+   F)Úcommitr   ÚmediaÚdatasetsT)Úexist_okÚrúdataset:dataset_label©r   zupload.htmlzNew dataset)r   Útitle)rY   r   r+   ÚFILESrZ   rc   r_   Ú
created_byra   Úosr   ÚjoinÚmakedirsÚzipfileÚZipFileÚ
extractallr   r   r   r   )r   r   r   Úuploaded_fileÚdataset_nameÚdataset_dirÚzip_refr   r   r   ÚnewÇ   s*   

ÿéþr—   c                 C   s    t t|| jd�}| ¡  tdƒS )N)ÚpkrŒ   z../../../dashboard/)r   r   r_   Údeleter   )r   r˜   r   r   r   r   r™   ì   s   r™   c                 C   s\   t t| jd�}| jdkr#t| j|d�}| ¡ r"| ¡  td|j	d�S ntƒ }t
| dd|iƒS )N)rŒ   r+   r)   rˆ   r‰   rI   r   )r   r   r_   rY   r   r+   rZ   rc   r   r   r   )r   r   r   r   r   r   Úeditó   s   
ýÿrš   )Údjango.contrib.auth.decoratorsr   Údjango.shortcutsr   r   r   Úformsr   r   r	   Ú
base.viewsr
   r   r   ÚscanpyrP   Úpandasri   Únumpyr5   r�   r�   Úmodelsr   r   r   r"   r-   r—   r™   rš   r   r   r   r   Ú<module>   s,    
 
$
